SNP Assistant is an easy-to-use tool for single nucleotide polymorphism (SNP) management, validation and analysis. SNP Assistant combines several post-genotyping methods and tools, which make it compact and useful tool for all companies and laboratories that genotype or use SNP data. SNP Assistant is not depending from any genotyping method.

download trial version v1.0.11 (30 days) and manual (4.7 Mb)   RELEASE NOTES
download manual v1.0.7 (11.4 Mb)
PRICING INFORMATION AND ORDERING

Simple interface     - simple input files ad menus - project based data managing - manual - Import & export from LINKAGE format	Marker and sample validation    - signal rate detection - allele frequency check - Hardy-Weinberg Equilibrium calculations
Case-control & TDT tests     - coloured tables to highlight significant results - Bonferroni correction	LD calculation and visualization tool     - calculation of D', r2, d2 etc. - zoom of particular region - picture save as *.bmp
Relationships testing    - similar to GRR - select and zoom of particular region	Comparison of datasets     - 2D plot with two datasets which include same markers - select and zoom of particular region

TDT, genome, genetic epidemiology, haplotype, haploblock,
htSNP, gtSNP          

System requirements

• Windows 95/98/2000/XP/ME
• 32 Mb RAM
• Al least 10 Mb free hard disk space
• Pentium or better processor

The actual amount of memory and CPU speed required depends on the size of data used. There is no upper limit. For average-sized genotyping data with 1000 markers and 1000 samples Pentium III 500 or better and 128MB of operating memory is needed.

Information: snpassistant@biodata.ee    

SNP assistant is routinely used by scientists at Asper Biotech - a company performing custom genotyping projects for the research community.
   

Copyright © BioData Ltd.